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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919293.1_cds_XP_016468527.1_61153
CDS Infomation

[gene=LOC107791052] [db_xref=GeneID:107791052] [protein=ceramide kinase-like isoform X2] [protein_id=XP_016468527.1] [location=complement(join(13033..13170,13260..13326,13748..14125,14529..14630,15468..15617,15881..15965,16105..16131,16228..16432,17129..17221,18417..18509,18626..18793,18875..19036,20451..20627))] [gbkey=CDS]
Sequence

ATGGAGAGAAACCCAAATGAAAATGATTTTCTTGAAAACAATTTACCAGAGAATATACCC
TTTAATTCTCAAGACTCAATTTTTAGCTCAAATCTATTCTTGGATGGTGATGGAGAAATT
ATTCTTACTCAAACTTCTGATAAGTTGCATTGGAAATCTATTGAATCTGTACTTAATGGT
CAGGATCCATCATCTTGTTTCGGCATTGAACTTGTTTCTAAGAGCGAAACCACATTGTGT
TTTAGTGATATATACTCTGCAGAGTTCATTGATTTGGGTTTGGTACACGAAGCTTCCTTC
CGAAATGCTAGAGGACCTCTCCTGGGCCAATCATTTGAGATGTACCGATTTACAATACGC
GGAGTCCAGAAATCAAAGACGCAGCCTTCTGTTTTGGTTCCATCCCTTTACACTTTTGGC
CATAAGGATGCACAAACATGTCAGATGTGGGTTAATCGGATTAATGATTTTCTAAACATG
GATGAGGCAAGGCCCAAGAACCTTATGGTTTTTGTTCACCCAAAGAGTGGGAAAGGACTC
GGATGTAAAGTTTGGGAAACAGTGGCCCCTACATTTTCTCAAGCGAAAGTGAAAACGAAG
GTGACTGTGACAGAAAGGGCAGGCCAAGCTTTGGATATAATGTCCTCCATTACAAATAAA
GAGCTCCGTTCATATGACGGTGTAGTAGCAGTTGGCGGTGATGGATTTTTCAATGAAATA
CTGAACGGTCTTCTCTTGTCGAGGCACAAATCTTCATATCCACCACGCCCTACTGAAATT
AACCATCCCGTTGAGAAAAATGGCAACGGGCCTGTTCTTGATGCCAATGGGGATATCAGG
GACCCATCCGATAGTGGTGAAGATGAATCTCCTCTTCTAAAGCAATCAACAAACCTCAGA
ACCGGAGAAGATTCCTGCCAAACAGCGGAAGATCTCGAGTTTTCTTTCCCAAATGAAAAA
TTCAGATTTGGAATTATTCCAGCAGGATCAACAGATGCCATTGTAATTTGTACTACAGGG
GCGAGGGATGCTATAACTTCTGCATTGCAGATTGTCCTTGGTAAAGCGGTGTGCCTTGAT
GTAGCTCAAGTTGTAAGATGGAAAAAAACTTGTACATCTAAGGATGAACCCTGTGTACGT
TATGCAGCTTCTTTCGCTGGGTATGGGTTTTATGGAGATGTAATCACCGAGAGCGAGAAA
TACAGGTGGATGGGTCCTAAGCGGTATGATTATGCGGGAACAAAGGTGTTTCTACGTCAC
AGATCGTATGAAGCAGAAGTTGCATATGTGGAAGTTGAATCGGAAAAGAAAAACATAGGT
CTTGAGAAAGAGTCGTCGGGCAACTGGACAAAGGGATTGTGGTCCCTACTCAAAAAGTCC
GAAAGAGTAGCTTGTAGTGCAAACTGCGGTATTTGCAAAACAAAAGCAGGCCACACATCG
GCTAGATGTCCGAGCTTGGAGCCCTATTCAAAAGACTCGAGATGGTTAAAGTCCAGAGGG
CGTTTTCTTAGTGTTGGAGCTGCAGTAATCTCTTGCAGAAATGAAAAAGCGCCTGATGGT
CTGGTGGCTGATGCACACCTTTCAGATGGTTTTCTGCATCTTATATTAATTAAGGACTGC
CCTCATGCATTTTATTTGTGCCACCTTCTCCAGCTAGCAAAGAAGGATGGAAACCCGCTA
GATTTTGAATTCGTTGAGCATCACAAAACTCCAGCATTCACATTCACTTCCTTCGGCAAG
GAGAGCATATGGAACGTTGATGGCGAGCTCTTTCAAGCTCATCAACTTTCAGCTCAAGTA
TTTCGCGGGCTTATTAACTTATTTGCTAGTGGCCCTGAAGCCTAA

Peptide Sequence

PEP ID

XP_016468527.1
PEP Infomation

PREDICTED: ceramide kinase-like isoform X2 [Nicotiana tabacum]
Sequence

MERNPNENDFLENNLPENIPFNSQDSIFSSNLFLDGDGEIILTQTSDKLHWKSIESVLNG
QDPSSCFGIELVSKSETTLCFSDIYSAEFIDLGLVHEASFRNARGPLLGQSFEMYRFTIR
GVQKSKTQPSVLVPSLYTFGHKDAQTCQMWVNRINDFLNMDEARPKNLMVFVHPKSGKGL
GCKVWETVAPTFSQAKVKTKVTVTERAGQALDIMSSITNKELRSYDGVVAVGGDGFFNEI
LNGLLLSRHKSSYPPRPTEINHPVEKNGNGPVLDANGDIRDPSDSGEDESPLLKQSTNLR
TGEDSCQTAEDLEFSFPNEKFRFGIIPAGSTDAIVICTTGARDAITSALQIVLGKAVCLD
VAQVVRWKKTCTSKDEPCVRYAASFAGYGFYGDVITESEKYRWMGPKRYDYAGTKVFLRH
RSYEAEVAYVEVESEKKNIGLEKESSGNWTKGLWSLLKKSERVACSANCGICKTKAGHTS
ARCPSLEPYSKDSRWLKSRGRFLSVGAAVISCRNEKAPDGLVADAHLSDGFLHLILIKDC
PHAFYLCHLLQLAKKDGNPLDFEFVEHHKTPAFTFTSFGKESIWNVDGELFQAHQLSAQV
FRGLINLFASGPEA

Transcript Sequence

Gene sequence data has not been registered.